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Journal of the American Chemical Society 2010, 132 Hydrophobic Self-Assembly of a Perylenediimide-Linked DNA Dumbbell into Supramolecular Polymers. Neelakandan, Zhengzheng Pan, Mahesh Hariharan, Yan Zheng, Haim Weissman, Boris Rybtchinski, and Frederick D. Time-Dependent Enzyme Activity Dominated by Dissociation of J-Aggregates Bound to Protein Surface. The Journal of Physical Chemistry B 2012, 116 Systematic Investigation on the Central Metal Ion Dependent Binding Geometry of M-meso-Tetrakis(N-methylpyridinium-4-yl)porphyrin to DNA and Their Efficiency as an Acceptor in DNA-Mediated Energy Transfer.

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Effect of Axial Ligand on the Binding Mode of M-meso-Tetrakis(N-methylpyridinium-4-yl)porphyrin to DNA Probed by Circular and Linear Dichroism Spectroscopies. Journal of the American Chemical Society 2014, 136 Kinetic Control of Chirality in Porphyrin J-Aggregates.

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This article is cited by 103 publications. The dependence of each of these kinetic terms on drug load and salt concentration is described. The remaining parameters are related to the size of the aggregation nucleus ( m) and the growth rate of the catalytic array ( n). The process is thus considered to be autocatalytic with two of the parameters ( k o and k c) representing the rate constants for the noncatalytic and catalytic pathways, respectively. A theoretical basis for the form of the integrated rate law is offered in which the formation of an aggregation nucleus is rate determining, a step that is catalyzed by the fractal array of porphyrins produced through the reaction. The kinetic data can be fit with a closed-form integrated rate law involving four kinetic parameters. The reactions show a complicated kinetic profile at both 422 (reactant peak) and 450 nm (product peak), beginning with an apparent induction period followed by a rapid color change whose rate depends on the initial conditions of concentration and ionic strength. The kinetics of formation of organized assemblies of trans-bis( N-methylpyridinium-4-yl)diphenylporphine (t-H 2P agg) on the surface of calf thymus DNA has been studied via stopped-flow techniques.

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